基本介绍

副教授 博士生导师

 

专业方向

周倩课题组从事马铃薯遗传育种研究和基因组学生信算法开发。通过组学技术的创新，挖掘优质、高产的功能基因，应用于马铃薯分子育种。课题组关注AI技术在农业基因组学领域的应用，尤其是植物DNA基础模型，基于AI的变异序列分析等方向。

研究内容一：马铃薯功能基因组学与遗传育种

研究内容二：杂合与多倍体基因组生物信息学方法开发

 

课题组博后招聘

1. 围绕课题组研究方向展开独立研究，可选择研究方向：（1）马铃薯高产性状基因挖掘（2）多倍体基因组分析算法开发 （3）基于AI的基因组功能元件分析。鼓励申请者在此研究方向内自主选题。

2. 近三年获得（不限于）植物学、园艺学、遗传学、生物信息学、计算机科学等专业博士学位。在博士阶段以第一或通讯作者发表至少一篇SCI论文。

 

人才项目

入选青年科学基金B类（原优青）项目（2025）

中山大学逸仙学者（2024）

 

教育经历

2015.09 - 2019.06  中国农业科学院 深圳农业基因组所，博士

2012.09 - 2015.06  中国农业科学院 蔬菜花卉研究所，硕士

2008.09 - 2012.06  中国海洋大学 海洋生物资源与环境，学士

 

工作经历

2024.08 - 至今 中山大学 农业与生物技术学院，副教授

2019.07 - 2024.07 鹏城实验室网络智能部, 助理研究员

 

科研成果

发表论文 (#共同一作,  *共同通讯)

  1. Zhou Q.*, Ji F.H.*, Lin D.X.*, Liu X.M., Zhu Z.Z., Ruan J.# A fast DBG-based haplotype assembly tool approaching data-in time cost. Nature Communications, 2024, 15, 3126.

  2. Ji F.H.*, Zhou Q.*, Ruan J., Zhu Z.Z., Liu X.M.#, A compressive seeding algorithm in conjunction with reordering-based compression. Bioinformatics, 2024, 40(3): btae100.

  3. Bao Z.G.*, Li C.H.*, Li G.C.*, Wang P, Peng Z., Cheng L., Li H.B., Zhang Z.Y., Li Y.Y., Huang W., Ye M.W., Dong D.F., Cheng Z.K., Van der Zaag P., Evert J., Bachem C.W.B., Dong S.M., Zhang C.Z., Huang S.W.#, Zhou Q.# Genome architecture and tetrasomic inheritance of autotetraploid potato. Molecular Plant. 2022, 15(7): 1211-1226.

  4. 唐蝶*, 周倩#. 植物基因组组装技术研究进展。生物技术通报，2021，37（6）：1-12.

  5. Zhou Q.*, Tang D.*, Huang W., Yang Z.M., Zhang Y., Hamilton J.P., Visser G.R.F., Bachem C.W.B., Bell C.R., Zhang Z.H., Zhang C.Z., Huang S.W.# Haplotype-resolved genome analyses of a heterozygous diploid potato, Nature Genetics, 2020,52:1018-1023.

  6. Zhou Q.*, Miao H.*, Li S.*, Zhang S.P., Wang Y., Weng Y.Q., Zhang Z.H.#, Huang S.W.#, Gu X.F.#. A sequencing-based linkage map of cucumber. Molecular Plant, 2015, 8(6):961-3.

  7. Zhou Q.*, Wang S.H.*, Hu B.W.*, Chen H.M., Zhang Z.H.#, Huang S.W.#. An ACCUMULATION AND REPLICATION OF CHLOROPLASTS 5 gene mutation confers light green peel in cucumber. Journal of Integrative Plant Biology, 2015, 57: 936-942.

  8. Fang Y.H.*,#, Qin X.*, Liao Q.G.*, Du R.*, Luo X.Z., Zhou Q., Li Z., Chen H.C., Jin W.T., Yuan Y., Sun P.B., Zhang R., Zhang J., Wang L., Cheng S.F., Yang X.Y., Yan Y.H, Zhang X.T,, Zhang Z.H., Bai S.N., Van de Peer Y, Lucas W.J., Huang S.W., Yan J.B.. The genome of homosporous maidenhair fern sheds light on the euphyllophyte evolution and defences. Nature Plants. 2022, 8(9): 1024-1037.

  9. Xiong X.Y.*, Gou J.B.*, Liao Q.G.*, Li Y.L.*, Zhou Q., Bi G.Q., Li C., Du R., Wang X.T., Sun T.S., Guo L.J., Liang H.F., Lu P.J., Wu Y.Y., Zhang Z.H., Ro D.K., Shang Y., Huang S.W.#, Yan J.B.#. The Taxus genome provides insights into paclitaxel biosynthesis. Nature Plants, 2021, 5,1026-1036.

  10. Xie D.S.*, Xu Y.C.*, Wang J.P., Liu W.R., Zhou Q., Luo S.B., Huang W., He X.M., Li Q., Peng Q.W., Yang X.Y., Yuan J.Q., Yu J.Q., Wang X.Y., Lucas, W.J., Huang S.W., Jiang B.#, Zhang Z.H.#. The wax gourd genomes offer insights into the genetic diversity and ancestral cucurbit karyotype. Nature Communications, 2019, 10(1):5158.

  11. Li Q.*, Li H.B.*, Huang W., Xu Y.C., Zhou Q., Wang S.H., Ruan, J., Huang S.W., Zhang Z.H. #. A chromosome-scale genome assembly of cucumber (Cucumis sativus L.). Gigascience, 2019, 8(6), pii: giz072.

  12. Wang Y.*, Zhou Q., Zhu G.T., Wang S.H., Ma Y.S., Miao H., Zhang S.P., Huang S.W., Zhang Z.H.#, Gu X.F.#. Genetic analysis and identification of a candidate gene associated with in vitro regeneration ability of cucumber. Theoretical And Applied Genetics, 2018, 131(12): 2663-2675.

  13. Li Y.* #, Shen H.*, Zhou Q., Qian. K., Theo van der Lee, Huang S.W.#. Changing ploidy as a strategy: The Irish potato famine pathogen shifts ploidy in relation to its sexuality. Molecular Plant-Microbe Interactions, 2017, 30(1): 45-52. 

  14. Bu F.J.*, Chen H.M.*, Shi Q.X.*, Zhou Q., Gao D.L., Zhang Z.H., Huang S.W.#. A major quantitative trait locus conferring subgynoecy in cucumber. Theoretical And Applied Genetics, 2016, 129(1): 97-104.

  15. Shang Y.*, Ma Y.S.*, Zhou Y.*, Zhang H.M.*, Duan L.X., Chen H.M., Zeng J.G., Zhou Q., Wang S.H., Gu W.J., Liu M., Ren J.W., Gu X.F., Zhang S.P., Wang Y., Yasukawa, K, Bouwmeester, H. J., Qi X.Q., Zhang Z.H., Lucas, W.J., Huang S.W.#. Biosynthesis, regulation, and domestication of bitterness in cucumber. Science, 2014, 346(213): 1084-1088.

  16. Lu H.F.*, Lin T.*, Klein J., Wang S.H., Qi J.J., Zhou Q., Sun J.J., Zhang Z.H., Weng Y.Q., Huang S.W.#. QTL-seq identifies an early flowering QTL located near Flowering Locus T in cucumber. Theoretical And Applied Genetics, 2014, (7): 1491-1499.

  17. Lin K.*, Limpens E.*, Zhang Z.H., Ivanov S., Saunders G.O. D., Mu D.S., Pang E., Cao H.F., Cha H., Lin T., Zhou Q., Shang Y., Li Y., Sharma T., Velzen R., Ruijter N., Aanen K., Win J., Kamoun S., Bisseling T., Geurts R., Huang S.W.#. Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLoS Genet. 2014, 10(1): e1004078

 

社会兼职

aBIOTECH 青年编委

Plant Biotechnology Journal, GigaScience, Horticulture Research, Plant Communications等期刊审稿人