基本介绍
张雨
博士 副教授 硕导
专业方向
植物演化与合成生物学
研究内容:1. 植物抗病虫系统演化;2. 植物抗病虫化合物合成;3. 药用芳香植物开发利用。
课题组博士后及专职科研人员岗位招聘要求:1. 具有生物化学与分子生物学或植物保护、生物信息学、基因组学、等相关专业博士学位;2. 有较好的外语水平或相关论文发表经验;3. 要求能独立设计并开展研究工作;4. 协助课题组完成项目申请、参与研究生培养及实验室日常管理等。应聘者请将应聘材料(1)简历(2)自荐信(3)毕业论文或代表性成果发送至zhangy2526@mail.sysu.edu.cn
人才项目
百人计划
教育经历
2010.9-2016.6,华中农业大学,园艺林学学院,蔬菜学,博士
2016.1-2016.4,美国唐纳德丹佛植物科学中心,联合培养博士
2014.1-2015.12,美国特拉华大学,联合培养博士
2006.9-2010.6,华中农业大学,水产学院,水族科学与技术,学士
2007.9-2010.6,华中科技大学,外国语学院,英语,学士
工作经历
2024.04至今,中山大学,农业与生物技术学院,副教授
2021.12-2024.03,中山大学,农学院,副教授
2018.11-2021.12,中国农业科学院农业基因组研究所,副研究员
2016.7-2018.10,南方科技大学,高级研究学者
2016.7-2018.10,武汉大学,博士后
科研成果
发表论文(#通讯作者)
Zhang Y, Fu Y, Xian W, Li X, Feng Y, Bu F, Shi Y, Chen S, Velzen, R. van, Battenberg K, Berry A M, Salgado M G, Liu H, Yi T, Fournier P, Alloisio N, Pujic P, Boubakri H, Schranz M E, Delaux P-M, Wong G K, Hocher V, Svistoonoff S, Gherbi H, Wang E, Kohlen W, Wall L G, Parniske M, Pawlowski K, Philippe N, Doyle J J, Cheng S. Comparative Phylogenomics and Phylotranscriptomics Provide Insights into the Genetic Complexity of Nitrogen Fixing Root Nodule Symbiosis. Plant Commun. 2024. 5: 100671.
Liao X, Xie D, Bao T, Hou M, Li C, Nie B, Sun S, Peng D, Hu H, Wang H, Tao Y, Zhang Y, Li W, Wang L. Inversions Encounter Relaxed Genetic Constraints and Balance Birth and Death of TPS Genes in Curcuma. Nature Commu. 2024, 15 (1), 9349.
Ali M, Muhammad A, Lin Z, He H, Zhang Y#. Exploring Lamiaceae-derived bioactive compounds as nature’s arsenal for sustainable pest management. Phytochem Rev. 2024, https://doi.org/10.1007/s11101-024-09987-z
Ali M, Yang T, He H, Zhang Y#. Plant biotechnology research with single-cell transcriptome: recent advancements and prospects. Plant Cell Rep. 2024, 43: 75.
Ye K, Bu F, Zhong L, Dong Z, Ma Z, Tang Z, Zhang Y, Yang X, Xu X, Wang E, Lucas W. J, Huang S, Liu H, Zheng J. Mapping the molecular landscape of Lotus japonicus nodule organogenesis through spatiotemporal transcriptomics. Nat Commun. 2024, 15(1): 6387
Ma H, Feng Y, Cao Q, Jia J, Ali M, Shah D, Meyers BC, He H#, Zhang Y#. Evolution of antimicrobial cysteine-rich peptides in plants. Plant Cell Rep. 2023. 42: 1517–1527
Wu Y, Li D, Hu Y, Li H, Ramstein G, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, Zhang C, Städler T, Buckler E, Huang S. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. 2023, 186: 2313–2328
Cao Q, Wang S, Ma H, Luo S, He H#, Zhang Y#. Hyper non-CG methylation of expanded plant disease resistance NLR genes. Plant Cell Rep. 2023. 42: 1251–1254
Luo X, Chen S, Zhang Y#. PlantRep: a database of plant repetitive elements. Plant Cell Rep. 2022, 41:1163–1166.
Zhou Q, Tang D, Huang W, Yang Z, Zhang Y, Hamilton J, Visser R, Bachem B, Buell R, Zhang Z, Zhang C, Huang S. Haplotype-resolved genome analyses of a heterozygous diploid potato. Nature Genetics. 2020, 52: 1018–1023
Su W, Tao R, Liu W, Yu C, Yue Z, He S, Lavelle Dean, Zhang W, Zhang L, An Guanghui, Zhang Y, Hu Q, Larkin R, Michelmore R, Kuang H, Chen J. Characterization of four polymorphic genes controlling red leaf colour in lettuce that have undergone disruptive selection since domestication. Plant biotechnol J. 2020, 18(2): 479-490
Cheng S, Xian W, Fu Y, Marin B, Keller J, Wu T, Sun W, Li X, Xu Y, Zhang Y, Wittek S, Reder T, Günther G, Gontcharov A, Wang S, Li L, Liu X, Wang J, Yang H, Xu X, Delaux PM, Melkonian B, Wong GK. Melkonian M Genomes of Subaerial Zygnematophyceae Provide Insights into Land Plant Evolution. Cell. 2019, 179(5):1057-1067
Zhang Y, Harris J, Liu Q, Liu W, Ausin I, Long Y, Xiao L, Feng L, Chen X, Chen X, Zhan L, Feng S, Li J, Wang F, Zhai J, Jacobsen S. Large-scale comparative epigenomics reveals hierarchical regulation of non-CG methylation in Arabidopsis. PNAS. 2018, 115(5):E1069-E1074
Fei Q, Yu Y, Liu L, Zhang Y, Baldrich P, Dai Q, Chen X, Meyers BC. Biogenesis of a 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation. PNAS. 2018, 201807403
Zhang Y, Xia R, Kuang H, Meyers BC. The Diversification of plant NBS-LRR genes directs the evolution of microRNAs that target them. Mol Biol Evol. 2016, 33(10):2692-2705
Fei Q, Zhang Y, Xia R, Meyers BC. Small RNAs add Zing to the Zig-Zag-Zig model of plant defenses. Mol Plant Microbe Interact. 2016, 29(3): 165-169
Zhang Y, Yan C, Kuang H. GC content fluctuation around plant small RNA-generating sites. FEBS Lett. 2014, 588(5): 764–769
Chen J, Hu Q, Zhang Y, Lu C, Kuang H. P-MITE: a database for plant miniature inverted-repeat transposable elements. Nucleic Acids Res. 2014, 42(D1): D1176–D1181
Yin LF, Wang F, Zhang Y, Kuang H, Schnabel G, Li GQ, Luo CX. Evolutionary analysis revealed the horizontal transfer of the Cyt b gene from Fungi to Chromista. Mol Phylogenet Evol. 2014, 76: 155–161
Lin X, Zhang Y, Kuang H, Chen J. Frequent loss of lineages and deficient duplications accounted for low copy number of disease resistance genes in Cucurbitaceae. BMC Genomics. 2013, 14(1): 335.
Luo S*, Zhang Y*, Hu Q, Li K, Chen J, Liu H, Wang W, Kuang H, Dynamic Nucleotide-Binding-Site and Leucine-Rich-Repeat-encoding Genes in the Grass Family. Plant physiol. 2012, 159(1):197-210
Yin L, Hu M, Wang F, Kuang H, Zhang Y, Schnabel G, Li G, Luo C. Frequent gain and loss of introns in fungal cytochrome b genes. PLoS ONE. 2012 November 7(11): e49096.
Chen J, Lu C, Zhang Y, Kuang H. Miniature inverted-repeat transposable elements (MITEs) in rice were originated and amplified predominantly after the divergence of Oryza and Brachypodium and contributed considerable diversity to the species. Mob Genet Elements. 2012, 2(3):127-132.
Lu C, Chen J, Zhang Y, Hu Q, Su W, Kuang H. Miniature inverted-repeat transposable elements (MITEs) have been accumulated through amplification bursts and play important roles on gene expression and species diversity in Oryza sativa. Mol Biol Evol. 2011, 29:1005-1017
科研项目
中山大学高校基本科研业务费重点领域项目(24xkjc020), 2024/01-2026/12, 在研,主持
国家自然科学基金委面上项目(32070250),2021/01-2024/12,在研,主持
中山大学“百人计划”人才启动项目,2021.12-2024.12,在研,主持
科技部专项(QN2022162002L),2022/01-2023/12,结题,主持
国家自然科学基金委青年项目(31700192),2018/01-2020/12,结题,主持
广东省自然科学基金面上项目(2020A1515011030),2019/10-2022/09,结题,主持
中国西南野生生物种质资源库“交叉合作团队”开放研究项目基础研究重点项目,2019/01-2020/12,结题,主持
国家重点研发计划(2018YFA0903202),2019/07 -2024/06,结题,核心成员
国家自然科学基金委面上项目(31370673),2014/01-2017/12,结题,参与
国家自然科学基金委面上项目(31272030),2013/01-2016/12,结题,参与
广东省“珠江人才计划”第六批引进创新创业团队(2016ZT06S172),201707 -202207,结题,核心成员
中国农业科学院重大科研任务(CAAS-ZDRW202009),2019/01-2021/12,结题,核心成员
中国农业科学院-广西壮族自治区农业科学院科技创新工程协同创新任务,2019/01 -2021/12,结题,核心成员
社会兼职
PNAS, Genome Research, Current Opinion in Plant Biology, Frontiers in Plant Science等期刊审稿人